2.000 Å
X-ray
2006-02-06
Name: | ATP-dependent molecular chaperone HSP82 |
---|---|
ID: | HSP82_YEAST |
AC: | P02829 |
Organism: | Saccharomyces cerevisiae |
Reign: | Eukaryota |
TaxID: | 559292 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 22.056 |
---|---|
Number of residues: | 31 |
Including | |
Standard Amino Acids: | 29 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 2 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.665 | 418.500 |
% Hydrophobic | % Polar |
---|---|
50.00 | 50.00 |
According to VolSite |
HET Code: | RDA |
---|---|
Formula: | C18H18ClNO8 |
Molecular weight: | 411.790 g/mol |
DrugBank ID: | DB08464 |
Buried Surface Area: | 53.05 % |
Polar Surface area: | 145.55 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 8 |
H-Bond Donors: | 5 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 7 |
X | Y | Z |
---|---|---|
21.5856 | 35.5246 | 5.31018 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C2 | CB | ASN- 37 | 3.58 | 0 | Hydrophobic |
C7 | CB | ALA- 41 | 4.2 | 0 | Hydrophobic |
C4 | CB | ALA- 41 | 3.94 | 0 | Hydrophobic |
O2 | OD2 | ASP- 79 | 2.57 | 177.83 | H-Bond (Ligand Donor) |
O2 | OD1 | ASP- 79 | 3.38 | 125.47 | H-Bond (Ligand Donor) |
C7 | CG2 | ILE- 82 | 3.59 | 0 | Hydrophobic |
C7 | CG | MET- 84 | 3.93 | 0 | Hydrophobic |
C9 | CE | MET- 84 | 3.63 | 0 | Hydrophobic |
CL | CD2 | LEU- 93 | 4.42 | 0 | Hydrophobic |
O8 | NZ | LYS- 98 | 2.99 | 155.87 | H-Bond (Protein Donor) |
CL | CD1 | PHE- 124 | 3.38 | 0 | Hydrophobic |
C4 | CB | THR- 171 | 4.02 | 0 | Hydrophobic |
C3 | CG2 | THR- 171 | 4.36 | 0 | Hydrophobic |
C2 | CD1 | LEU- 173 | 3.72 | 0 | Hydrophobic |