2.250 Å
X-ray
2005-07-26
Name: | Serum albumin |
---|---|
ID: | ALBU_HUMAN |
AC: | P02768 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 53.457 |
---|---|
Number of residues: | 14 |
Including | |
Standard Amino Acids: | 14 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.298 | 1329.750 |
% Hydrophobic | % Polar |
---|---|
52.54 | 47.46 |
According to VolSite |
HET Code: | IOS |
---|---|
Formula: | C8H6NO4S |
Molecular weight: | 212.203 g/mol |
DrugBank ID: | DB07992 |
Buried Surface Area: | 38.88 % |
Polar Surface area: | 90.6 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 1 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 1 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
46.6882 | 38.1146 | 57.1861 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
DuAr | NZ | LYS- 195 | 3.96 | 136.42 | Pi/Cation |
C3 | CD | LYS- 195 | 3.86 | 0 | Hydrophobic |
C7 | CH2 | TRP- 214 | 3.37 | 0 | Hydrophobic |
O3 | NH2 | ARG- 218 | 3.29 | 124.64 | H-Bond (Protein Donor) |
O4 | NH2 | ARG- 218 | 2.76 | 170.83 | H-Bond (Protein Donor) |
O4 | CZ | ARG- 218 | 3.62 | 0 | Ionic (Protein Cationic) |
O3 | CZ | ARG- 222 | 3.91 | 0 | Ionic (Protein Cationic) |
C5 | CB | ALA- 291 | 3.79 | 0 | Hydrophobic |