1.900 Å
X-ray
2005-06-03
| Name: | ATP-dependent molecular chaperone HSP82 |
|---|---|
| ID: | HSP82_YEAST |
| AC: | P02829 |
| Organism: | Saccharomyces cerevisiae |
| Reign: | Eukaryota |
| TaxID: | 559292 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 24.562 |
|---|---|
| Number of residues: | 29 |
| Including | |
| Standard Amino Acids: | 27 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 2 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.049 | 540.000 |
| % Hydrophobic | % Polar |
|---|---|
| 47.50 | 52.50 |
| According to VolSite | |

| HET Code: | H64 |
|---|---|
| Formula: | C18H22BrN6O2S |
| Molecular weight: | 466.375 g/mol |
| DrugBank ID: | DB07877 |
| Buried Surface Area: | 42.13 % |
| Polar Surface area: | 129.99 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 7 |
| H-Bond Donors: | 2 |
| Rings: | 4 |
| Aromatic rings: | 3 |
| Anionic atoms: | 0 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 7 |
| X | Y | Z |
|---|---|---|
| 52.6484 | 35.6693 | -3.3045 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| N6 | OD2 | ASP- 79 | 2.98 | 160.65 | H-Bond (Ligand Donor) |
| C91 | SD | MET- 84 | 3.86 | 0 | Hydrophobic |
| C6' | CE | MET- 84 | 4.05 | 0 | Hydrophobic |
| C5' | SD | MET- 84 | 4.15 | 0 | Hydrophobic |
| C'2 | CZ | PHE- 124 | 3.8 | 0 | Hydrophobic |
| C2' | CB | PHE- 124 | 3.6 | 0 | Hydrophobic |
| DuAr | DuAr | PHE- 124 | 3.71 | 0 | Aromatic Face/Face |
| BR | CE2 | TYR- 125 | 4.04 | 0 | Hydrophobic |
| C'2 | CG2 | VAL- 136 | 3.93 | 0 | Hydrophobic |
| C'2 | CE2 | TRP- 148 | 3.34 | 0 | Hydrophobic |
| N1 | O | HOH- 1006 | 2.76 | 164.33 | H-Bond (Protein Donor) |