1.700 Å
X-ray
2005-02-14
Name: | Probable nicotinate-nucleotide adenylyltransferase |
---|---|
ID: | NADD_PSEAE |
AC: | Q9HX21 |
Organism: | Pseudomonas aeruginosa |
Reign: | Bacteria |
TaxID: | 208964 |
EC Number: | 2.7.7.18 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 96 % |
C | 4 % |
B-Factor: | 31.404 |
---|---|
Number of residues: | 24 |
Including | |
Standard Amino Acids: | 24 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.509 | 479.250 |
% Hydrophobic | % Polar |
---|---|
35.92 | 64.08 |
According to VolSite |
HET Code: | NCN |
---|---|
Formula: | C11H12NO9P |
Molecular weight: | 333.188 g/mol |
DrugBank ID: | DB02382 |
Buried Surface Area: | 35.28 % |
Polar Surface area: | 175.93 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 9 |
H-Bond Donors: | 2 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 3 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 5 |
X | Y | Z |
---|---|---|
76.8231 | 61.3278 | 10.9756 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O8 | N | THR- 85 | 2.71 | 150.25 | H-Bond (Protein Donor) |
C5' | CB | ALA- 110 | 4.16 | 0 | Hydrophobic |
C1' | CH2 | TRP- 117 | 4.11 | 0 | Hydrophobic |
C6 | CE2 | TRP- 117 | 3.43 | 0 | Hydrophobic |