3.000 Å
X-ray
2004-11-08
| Name: | Adenylate cyclase |
|---|---|
| ID: | O32393_ARTPT |
| AC: | O32393 |
| Organism: | Arthrospira platensis |
| Reign: | Bacteria |
| TaxID: | 118562 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 57 % |
| B | 43 % |
| B-Factor: | 10.950 |
|---|---|
| Number of residues: | 30 |
| Including | |
| Standard Amino Acids: | 30 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.139 | 2649.375 |
| % Hydrophobic | % Polar |
|---|---|
| 43.31 | 56.69 |
| According to VolSite | |

| HET Code: | APC |
|---|---|
| Formula: | C11H14N5O12P3 |
| Molecular weight: | 501.176 g/mol |
| DrugBank ID: | DB02596 |
| Buried Surface Area: | 59.07 % |
| Polar Surface area: | 310.64 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 16 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 4 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 2 |
| Rotatable Bonds: | 8 |
| X | Y | Z |
|---|---|---|
| 33.8567 | 3.77461 | 57.9203 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C1' | CZ | PHE- 1015 | 4.5 | 0 | Hydrophobic |
| O2G | N | GLY- 1020 | 2.99 | 146.66 | H-Bond (Protein Donor) |
| O2G | N | THR- 1022 | 2.96 | 123.41 | H-Bond (Protein Donor) |
| N1 | NZ | LYS- 1057 | 3 | 169.44 | H-Bond (Protein Donor) |
| N6 | OG1 | THR- 1139 | 3 | 145.68 | H-Bond (Ligand Donor) |
| C5' | CB | ASN- 1146 | 4.24 | 0 | Hydrophobic |
| C4' | CB | ALA- 1149 | 4.4 | 0 | Hydrophobic |
| C1' | CB | ALA- 1149 | 3.89 | 0 | Hydrophobic |
| O2A | NH2 | ARG- 1150 | 2.66 | 122.73 | H-Bond (Protein Donor) |
| O2A | CZ | ARG- 1150 | 3.94 | 0 | Ionic (Protein Cationic) |
| O2B | NZ | LYS- 1184 | 2.73 | 0 | Ionic (Protein Cationic) |
| O2A | NZ | LYS- 1184 | 3.14 | 0 | Ionic (Protein Cationic) |
| O2A | NZ | LYS- 1184 | 3.14 | 164.28 | H-Bond (Protein Donor) |