2.400 Å
X-ray
2004-07-22
Name: | Estrogen receptor beta |
---|---|
ID: | ESR2_HUMAN |
AC: | Q92731 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 38.234 |
---|---|
Number of residues: | 30 |
Including | |
Standard Amino Acids: | 29 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.784 | 273.375 |
% Hydrophobic | % Polar |
---|---|
85.19 | 14.81 |
According to VolSite |
HET Code: | 272 |
---|---|
Formula: | C13H9NO4 |
Molecular weight: | 243.215 g/mol |
DrugBank ID: | DB06937 |
Buried Surface Area: | 78.25 % |
Polar Surface area: | 86.72 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 1 |
X | Y | Z |
---|---|---|
17.0815 | -3.77239 | 14.3501 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O24 | O | HOH- 82 | 3.45 | 142.59 | H-Bond (Protein Donor) |
C16 | SD | MET- 295 | 4.49 | 0 | Hydrophobic |
C18 | CB | LEU- 298 | 3.72 | 0 | Hydrophobic |
C6 | CD2 | LEU- 301 | 3.97 | 0 | Hydrophobic |
C6 | CB | ALA- 302 | 4.01 | 0 | Hydrophobic |
O24 | OE1 | GLU- 305 | 3.21 | 122.07 | H-Bond (Ligand Donor) |
C13 | CE | MET- 336 | 4.2 | 0 | Hydrophobic |
C6 | CD1 | LEU- 339 | 4.08 | 0 | Hydrophobic |
C2 | CB | LEU- 339 | 3.96 | 0 | Hydrophobic |
C2 | CD2 | LEU- 343 | 4.06 | 0 | Hydrophobic |
C15 | CD1 | ILE- 373 | 3.77 | 0 | Hydrophobic |
C15 | CD1 | ILE- 376 | 4.24 | 0 | Hydrophobic |
O22 | ND1 | HIS- 475 | 3.22 | 153.69 | H-Bond (Ligand Donor) |
C17 | CD1 | LEU- 476 | 4.02 | 0 | Hydrophobic |