2.100 Å
X-ray
2004-06-24
Name: | Aspartate carbamoyltransferase regulatory chain |
---|---|
ID: | PYRI_ECOLI |
AC: | P0A7F3 |
Organism: | Escherichia coli |
Reign: | Bacteria |
TaxID: | 83333 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 4 % |
D | 96 % |
B-Factor: | 83.135 |
---|---|
Number of residues: | 23 |
Including | |
Standard Amino Acids: | 23 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.284 | 459.000 |
% Hydrophobic | % Polar |
---|---|
38.97 | 61.03 |
According to VolSite |
HET Code: | CTP |
---|---|
Formula: | C9H12N3O14P3 |
Molecular weight: | 479.125 g/mol |
DrugBank ID: | DB02431 |
Buried Surface Area: | 53.77 % |
Polar Surface area: | 308.95 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 16 |
H-Bond Donors: | 3 |
Rings: | 2 |
Aromatic rings: | 0 |
Anionic atoms: | 4 |
Cationic atoms: | 0 |
Rule of Five Violation: | 1 |
Rotatable Bonds: | 8 |
X | Y | Z |
---|---|---|
28.7723 | 95.1547 | 43.2706 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O2B | N | MET- 1 | 2.82 | 148.98 | H-Bond (Protein Donor) |
C2' | CB | THR- 2 | 4.1 | 0 | Hydrophobic |
O2' | OG1 | THR- 2 | 2.55 | 154.26 | H-Bond (Protein Donor) |
N4 | O | ILE- 12 | 3.12 | 155.06 | H-Bond (Ligand Donor) |
C1' | CG1 | VAL- 17 | 4.43 | 0 | Hydrophobic |
C4' | CG1 | VAL- 17 | 4.5 | 0 | Hydrophobic |
O2 | NZ | LYS- 60 | 3.14 | 159.25 | H-Bond (Protein Donor) |
C5' | CG2 | VAL- 91 | 4.29 | 0 | Hydrophobic |
O1G | NZ | LYS- 94 | 3.05 | 154.88 | H-Bond (Protein Donor) |
O1G | NZ | LYS- 94 | 3.05 | 0 | Ionic (Protein Cationic) |