2.870 Å
X-ray
2004-02-17
Name: | Bifunctional dihydrofolate reductase-thymidylate synthase |
---|---|
ID: | Q27552_CRYPV |
AC: | Q27552 |
Organism: | Cryptosporidium parvum |
Reign: | Eukaryota |
TaxID: | 5807 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
E | 100 % |
B-Factor: | 42.869 |
---|---|
Number of residues: | 36 |
Including | |
Standard Amino Acids: | 34 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | UMP |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.348 | 702.000 |
% Hydrophobic | % Polar |
---|---|
55.77 | 44.23 |
According to VolSite |
HET Code: | F89 |
---|---|
Formula: | C27H22N4O6 |
Molecular weight: | 498.487 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 53.65 % |
Polar Surface area: | 154.06 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 8 |
H-Bond Donors: | 2 |
Rings: | 5 |
Aromatic rings: | 3 |
Anionic atoms: | 2 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 8 |
X | Y | Z |
---|---|---|
-145.239 | -14.2671 | 231.198 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CG | CB | TYR- 314 | 4.32 | 0 | Hydrophobic |
CA | CG2 | ILE- 315 | 4.39 | 0 | Hydrophobic |
CG | CG2 | ILE- 315 | 3.71 | 0 | Hydrophobic |
C8 | CD1 | ILE- 315 | 3.23 | 0 | Hydrophobic |
C5 | CD2 | LEU- 399 | 3.6 | 0 | Hydrophobic |
N2 | OD1 | ASP- 426 | 3.33 | 169.66 | H-Bond (Ligand Donor) |
C11 | CB | PHE- 433 | 3.46 | 0 | Hydrophobic |
C3M | CZ | TYR- 466 | 4.14 | 0 | Hydrophobic |
C3M | CG | MET- 519 | 3.88 | 0 | Hydrophobic |
C5 | SD | MET- 519 | 4.47 | 0 | Hydrophobic |
C3M | C4' | UMP- 619 | 3.59 | 0 | Hydrophobic |
C6A | C5 | UMP- 619 | 3.28 | 0 | Hydrophobic |
C6A | C5 | UMP- 619 | 3.28 | 0 | Hydrophobic |
C6A | C5 | UMP- 619 | 3.28 | 0 | Hydrophobic |