2.400 Å
X-ray
2002-08-28
| Name: | Nitric oxide synthase oxygenase |
|---|---|
| ID: | NOSO_STAAU |
| AC: | P0A004 |
| Organism: | Staphylococcus aureus |
| Reign: | Bacteria |
| TaxID: | 1280 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 55 % |
| B | 45 % |
| B-Factor: | 34.345 |
|---|---|
| Number of residues: | 23 |
| Including | |
| Standard Amino Acids: | 18 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 3 |
| Cofactors: | NAD |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.028 | 1336.500 |
| % Hydrophobic | % Polar |
|---|---|
| 46.21 | 53.79 |
| According to VolSite | |

| HET Code: | NAD |
|---|---|
| Formula: | C21H26N7O14P2 |
| Molecular weight: | 662.417 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 47.28 % |
| Polar Surface area: | 343.54 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 18 |
| H-Bond Donors: | 6 |
| Rings: | 5 |
| Aromatic rings: | 3 |
| Anionic atoms: | 2 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 3 |
| Rotatable Bonds: | 11 |
| X | Y | Z |
|---|---|---|
| 23.9517 | 93.7278 | 37.893 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O1A | NZ | LYS- 313 | 3.92 | 0 | Ionic (Protein Cationic) |
| O5B | NZ | LYS- 313 | 2.94 | 0 | Ionic (Protein Cationic) |
| O1N | NZ | LYS- 313 | 3.54 | 0 | Ionic (Protein Cationic) |
| O5B | NZ | LYS- 313 | 2.94 | 148.33 | H-Bond (Protein Donor) |
| C5D | CD2 | TRP- 314 | 3.58 | 0 | Hydrophobic |
| C2D | CZ2 | TRP- 314 | 4.02 | 0 | Hydrophobic |
| C3D | CE2 | TRP- 314 | 3.7 | 0 | Hydrophobic |
| O1N | OG | SER- 315 | 3.12 | 160.12 | H-Bond (Protein Donor) |
| C5D | CB | SER- 315 | 3.7 | 0 | Hydrophobic |
| O2D | O | TYR- 329 | 3.1 | 144 | H-Bond (Ligand Donor) |
| O3 | O | HOH- 1200 | 3.36 | 179.97 | H-Bond (Protein Donor) |