2.300 Å
X-ray
2001-12-05
Name: | ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 |
---|---|
ID: | BST1_HUMAN |
AC: | Q10588 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 3.2.2.6 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 30.265 |
---|---|
Number of residues: | 30 |
Including | |
Standard Amino Acids: | 27 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 3 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.192 | 361.125 |
% Hydrophobic | % Polar |
---|---|
53.27 | 46.73 |
According to VolSite |
HET Code: | NMN |
---|---|
Formula: | C11H14N2O8P |
Molecular weight: | 333.211 g/mol |
DrugBank ID: | DB03227 |
Buried Surface Area: | 66.01 % |
Polar Surface area: | 178.89 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 8 |
H-Bond Donors: | 3 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 2 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 5 |
X | Y | Z |
---|---|---|
15.8957 | 65.0102 | 149.115 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O3R | N | TRP- 77 | 2.96 | 161.37 | H-Bond (Protein Donor) |
C3R | CE2 | TRP- 77 | 4 | 0 | Hydrophobic |
O2P | OE1 | GLU- 78 | 2.69 | 142.88 | H-Bond (Protein Donor) |
C5R | CG | GLU- 78 | 4.3 | 0 | Hydrophobic |
C2R | CD2 | LEU- 97 | 4.12 | 0 | Hydrophobic |
N7 | OD2 | ASP- 107 | 2.78 | 163.92 | H-Bond (Ligand Donor) |
C5 | CB | TRP- 140 | 3.82 | 0 | Hydrophobic |
C4 | CD2 | TRP- 140 | 3.41 | 0 | Hydrophobic |
C4R | CB | PHE- 173 | 3.79 | 0 | Hydrophobic |
C4R | CB | PHE- 174 | 4.44 | 0 | Hydrophobic |
O3R | OE2 | GLU- 178 | 3.29 | 124.35 | H-Bond (Ligand Donor) |
O3R | OE1 | GLU- 178 | 2.81 | 170.39 | H-Bond (Ligand Donor) |
O2R | OE2 | GLU- 178 | 2.78 | 163.79 | H-Bond (Ligand Donor) |
O2R | O | HOH- 1002 | 2.71 | 127.32 | H-Bond (Protein Donor) |
O7 | O | HOH- 1064 | 2.98 | 180 | H-Bond (Protein Donor) |