1.900 Å
X-ray
2001-03-19
| Name: | Glutamate mutase epsilon subunit |
|---|---|
| ID: | GLME_CLOCO |
| AC: | P80077 |
| Organism: | Clostridium cochlearium |
| Reign: | Bacteria |
| TaxID: | 1494 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 4 % |
| B | 96 % |
| B-Factor: | 7.762 |
|---|---|
| Number of residues: | 26 |
| Including | |
| Standard Amino Acids: | 25 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.424 | 2136.375 |
| % Hydrophobic | % Polar |
|---|---|
| 47.55 | 52.45 |
| According to VolSite | |

| HET Code: | 5AD |
|---|---|
| Formula: | C10H13N5O3 |
| Molecular weight: | 251.242 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 59.1 % |
| Polar Surface area: | 119.31 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 7 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 1 |
| X | Y | Z |
|---|---|---|
| 6.84189 | -2.891 | 85.0499 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C1' | CD | ARG- 66 | 3.29 | 0 | Hydrophobic |
| C4' | CD | ARG- 66 | 3.79 | 0 | Hydrophobic |
| N6 | O | GLY- 68 | 3.18 | 160.06 | H-Bond (Ligand Donor) |
| N6 | O | ASN- 123 | 2.7 | 150.14 | H-Bond (Ligand Donor) |
| C5' | CE | MET- 294 | 4.18 | 0 | Hydrophobic |
| O2' | OE2 | GLU- 330 | 3.3 | 148.28 | H-Bond (Ligand Donor) |
| O3' | OE2 | GLU- 330 | 2.71 | 151.33 | H-Bond (Ligand Donor) |
| C5' | CG | GLU- 1305 | 3.29 | 0 | Hydrophobic |