2.400 Å
X-ray
2003-03-05
| Name: | Serum albumin |
|---|---|
| ID: | ALBU_HUMAN |
| AC: | P02768 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 48.610 |
|---|---|
| Number of residues: | 27 |
| Including | |
| Standard Amino Acids: | 27 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.699 | 664.875 |
| % Hydrophobic | % Polar |
|---|---|
| 54.82 | 45.18 |
| According to VolSite | |

| HET Code: | T44 |
|---|---|
| Formula: | C15H10I4NO4 |
| Molecular weight: | 775.862 g/mol |
| DrugBank ID: | DB00451 |
| Buried Surface Area: | 55.59 % |
| Polar Surface area: | 100.06 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 4 |
| H-Bond Donors: | 1 |
| Rings: | 2 |
| Aromatic rings: | 2 |
| Anionic atoms: | 2 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 1 |
| Rotatable Bonds: | 5 |
| X | Y | Z |
|---|---|---|
| 20.9213 | 11.5273 | 26.2988 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C6' | CB | ASP- 187 | 4.26 | 0 | Hydrophobic |
| I5' | CB | ASP- 187 | 3.75 | 0 | Hydrophobic |
| I5' | CB | GLU- 188 | 4.43 | 0 | Hydrophobic |
| O10 | NZ | LYS- 190 | 3.26 | 0 | Ionic (Protein Cationic) |
| I3 | CB | LYS- 190 | 3.68 | 0 | Hydrophobic |
| I3 | CB | ALA- 191 | 4.19 | 0 | Hydrophobic |
| I3' | CB | ALA- 191 | 4.31 | 0 | Hydrophobic |
| C3' | CB | ALA- 191 | 3.45 | 0 | Hydrophobic |
| N8 | OE2 | GLU- 425 | 3.9 | 0 | Ionic (Ligand Cationic) |
| N8 | OD1 | ASN- 429 | 2.95 | 161.58 | H-Bond (Ligand Donor) |
| I5 | CB | ASN- 429 | 3.86 | 0 | Hydrophobic |
| C6 | CB | ASN- 429 | 4.06 | 0 | Hydrophobic |
| I5 | CB | LYS- 432 | 3.54 | 0 | Hydrophobic |
| C6 | CD | LYS- 432 | 3.57 | 0 | Hydrophobic |
| I5 | CG2 | VAL- 433 | 4.08 | 0 | Hydrophobic |
| I3' | CB | ASP- 451 | 4.34 | 0 | Hydrophobic |
| I3' | CD1 | TYR- 452 | 3.89 | 0 | Hydrophobic |
| C4' | CE1 | TYR- 452 | 3.25 | 0 | Hydrophobic |
| C2' | CG2 | VAL- 455 | 3.62 | 0 | Hydrophobic |