3.000 Å
X-ray
1997-12-10
Name: | Annexin A5 |
---|---|
ID: | ANXA5_HUMAN |
AC: | P08758 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 93 % |
B | 7 % |
B-Factor: | 8.437 |
---|---|
Number of residues: | 28 |
Including | |
Standard Amino Acids: | 28 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.475 | 604.125 |
% Hydrophobic | % Polar |
---|---|
41.90 | 58.10 |
According to VolSite |
HET Code: | K21 |
---|---|
Formula: | C25H33N2O2S |
Molecular weight: | 425.607 g/mol |
DrugBank ID: | DB02929 |
Buried Surface Area: | 35.11 % |
Polar Surface area: | 59.28 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 3 |
H-Bond Donors: | 1 |
Rings: | 4 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 6 |
X | Y | Z |
---|---|---|
22.9839 | 16.9583 | -11.949 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C43 | CD1 | LEU- 5 | 3.35 | 0 | Hydrophobic |
C3 | CG2 | THR- 118 | 3.99 | 0 | Hydrophobic |
C33 | CG2 | THR- 118 | 3.82 | 0 | Hydrophobic |
C59 | CG | PRO- 119 | 3.85 | 0 | Hydrophobic |
C6 | CG | PRO- 119 | 3.33 | 0 | Hydrophobic |
C6 | CD | ARG- 161 | 3.66 | 0 | Hydrophobic |
C22 | CG1 | VAL- 203 | 4.29 | 0 | Hydrophobic |
C1 | CG2 | VAL- 203 | 4.14 | 0 | Hydrophobic |
O23 | NH2 | ARG- 207 | 3.14 | 159.37 | H-Bond (Protein Donor) |
C13 | CD1 | ILE- 244 | 3.6 | 0 | Hydrophobic |
S14 | CD1 | ILE- 247 | 4.31 | 0 | Hydrophobic |