1.900 Å
X-ray
2001-06-04
Name: | Pentaerythritol tetranitrate reductase |
---|---|
ID: | P71278_ENTCL |
AC: | P71278 |
Organism: | Enterobacter cloacae |
Reign: | Bacteria |
TaxID: | 550 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 21.456 |
---|---|
Number of residues: | 23 |
Including | |
Standard Amino Acids: | 22 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 0 |
Cofactors: | FMN |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.340 | 357.750 |
% Hydrophobic | % Polar |
---|---|
42.45 | 57.55 |
According to VolSite |
HET Code: | ANB |
---|---|
Formula: | C19H24O2 |
Molecular weight: | 284.393 g/mol |
DrugBank ID: | DB07373 |
Buried Surface Area: | 62.91 % |
Polar Surface area: | 34.14 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 2 |
H-Bond Donors: | 0 |
Rings: | 4 |
Aromatic rings: | 0 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 0 |
X | Y | Z |
---|---|---|
21.525 | 11.9931 | 18.5816 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C6 | CB | THR- 26 | 3.51 | 0 | Hydrophobic |
C15 | CE2 | TYR- 68 | 3.72 | 0 | Hydrophobic |
C7 | CE2 | TYR- 68 | 3.83 | 0 | Hydrophobic |
C16 | CD | ARG- 142 | 3.92 | 0 | Hydrophobic |
O1 | NE2 | HIS- 181 | 2.69 | 150.48 | H-Bond (Protein Donor) |
O1 | ND1 | HIS- 184 | 2.7 | 160.22 | H-Bond (Protein Donor) |
C19 | CD1 | LEU- 275 | 3.97 | 0 | Hydrophobic |
C18 | CE2 | TYR- 351 | 4.04 | 0 | Hydrophobic |
C7 | CE1 | TYR- 351 | 3.85 | 0 | Hydrophobic |
C15 | CZ | TYR- 351 | 3.83 | 0 | Hydrophobic |
C6 | C6 | FMN- 1365 | 3.68 | 0 | Hydrophobic |
C19 | C9A | FMN- 1365 | 3.49 | 0 | Hydrophobic |