2.800 Å
X-ray
2002-08-24
Name: | Squalene--hopene cyclase |
---|---|
ID: | SQHC_ALIAD |
AC: | P33247 |
Organism: | Alicyclobacillus acidocaldarius subsp. acidocaldarius |
Reign: | Bacteria |
TaxID: | 521098 |
EC Number: | 4.2.1.129 |
Chain Name: | Percentage of Residues within binding site |
---|---|
C | 100 % |
B-Factor: | 27.614 |
---|---|
Number of residues: | 43 |
Including | |
Standard Amino Acids: | 40 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 3 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.478 | 776.250 |
% Hydrophobic | % Polar |
---|---|
69.13 | 30.87 |
According to VolSite |
HET Code: | R01 |
---|---|
Formula: | C24H23BrNO |
Molecular weight: | 421.350 g/mol |
DrugBank ID: | DB03234 |
Buried Surface Area: | 62.94 % |
Polar Surface area: | 21.51 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 1 |
H-Bond Donors: | 1 |
Rings: | 3 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 7 |
X | Y | Z |
---|---|---|
102.744 | 28.4269 | 66.5404 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
BR27 | CE2 | PHE- 129 | 3.76 | 0 | Hydrophobic |
C5G | CB | TRP- 169 | 4.19 | 0 | Hydrophobic |
C6G | CD1 | ILE- 261 | 4.08 | 0 | Hydrophobic |
C2A | CG2 | ILE- 261 | 3.68 | 0 | Hydrophobic |
C1G | CG | PRO- 263 | 3.61 | 0 | Hydrophobic |
C3A | CB | ALA- 306 | 4.46 | 0 | Hydrophobic |
C2A | CB | SER- 307 | 3.86 | 0 | Hydrophobic |
N1D | OD2 | ASP- 374 | 3.85 | 0 | Ionic (Ligand Cationic) |
C6B | CD1 | LEU- 607 | 4.05 | 0 | Hydrophobic |