2.200 Å
X-ray
1999-01-05
Name: | Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase |
---|---|
ID: | MCE_VACCW |
AC: | P07617 |
Organism: | Vaccinia virus ) |
Reign: | Viruses |
TaxID: | 10254 |
EC Number: | 2.1.1.57 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 23.553 |
---|---|
Number of residues: | 18 |
Including | |
Standard Amino Acids: | 17 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.835 | 320.625 |
% Hydrophobic | % Polar |
---|---|
60.00 | 40.00 |
According to VolSite |
HET Code: | MG7 |
---|---|
Formula: | C11H16N5O5 |
Molecular weight: | 298.275 g/mol |
DrugBank ID: | DB03493 |
Buried Surface Area: | 37.51 % |
Polar Surface area: | 146.21 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 7 |
H-Bond Donors: | 5 |
Rings: | 3 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
16.5256 | 11.9971 | 22.8379 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CN7 | CE1 | TYR- 22 | 4.13 | 0 | Hydrophobic |
C4' | CB | ALA- 27 | 4.22 | 0 | Hydrophobic |
CN7 | CZ | PHE- 180 | 4.32 | 0 | Hydrophobic |
CN7 | CB | ALA- 206 | 4.42 | 0 | Hydrophobic |
N1 | NE2 | GLN- 233 | 3.06 | 159.26 | H-Bond (Protein Donor) |