2.700 Å
X-ray
2000-08-23
| Name: | Methyl-coenzyme M reductase I subunit alpha | Methyl coenzyme M reductase, beta subunit |
|---|---|---|
| ID: | MCRA_METKA | Q49601_9EURY |
| AC: | Q49605 | Q49601 |
| Organism: | Methanopyrus kandleri | |
| Reign: | Archaea | |
| TaxID: | 190192 | 2320 |
| EC Number: | / | |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 44 % |
| D | 17 % |
| B | 28 % |
| C | 11 % |
| B-Factor: | 20.326 |
|---|---|
| Number of residues: | 20 |
| Including | |
| Standard Amino Acids: | 18 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.028 | 327.375 |
| % Hydrophobic | % Polar |
|---|---|
| 43.30 | 56.70 |
| According to VolSite | |

| HET Code: | COM |
|---|---|
| Formula: | C2H5O3S2 |
| Molecular weight: | 141.189 g/mol |
| DrugBank ID: | DB09110 |
| Buried Surface Area: | 53.94 % |
| Polar Surface area: | 104.38 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 4 |
| H-Bond Donors: | 1 |
| Rings: | 0 |
| Aromatic rings: | 0 |
| Anionic atoms: | 1 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| 65.7424 | 9.49386 | 109.196 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C1 | CZ | TYR- 336 | 4.43 | 0 | Hydrophobic |
| S1 | CE2 | TYR- 336 | 3.74 | 0 | Hydrophobic |
| C2 | CE1 | PHE- 362 | 4.17 | 0 | Hydrophobic |
| C2 | CE1 | TYR- 368 | 3.87 | 0 | Hydrophobic |
| S1 | CZ | TYR- 368 | 4.21 | 0 | Hydrophobic |
| C1 | CB | PHE- 446 | 3.67 | 0 | Hydrophobic |
| O1S | N | TYR- 447 | 2.89 | 175.68 | H-Bond (Protein Donor) |