2.500 Å
X-ray
1992-05-15
| Name: | Phosphoribosylglycinamide formyltransferase |
|---|---|
| ID: | PUR3_ECOLI |
| AC: | P08179 |
| Organism: | Escherichia coli |
| Reign: | Bacteria |
| TaxID: | 83333 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| C | 100 % |
| B-Factor: | 16.979 |
|---|---|
| Number of residues: | 30 |
| Including | |
| Standard Amino Acids: | 29 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.959 | 813.375 |
| % Hydrophobic | % Polar |
|---|---|
| 45.23 | 54.77 |
| According to VolSite | |

| HET Code: | GAR |
|---|---|
| Formula: | C7H14N2O8P |
| Molecular weight: | 285.168 g/mol |
| DrugBank ID: | DB02236 |
| Buried Surface Area: | 58.65 % |
| Polar Surface area: | 188.65 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 8 |
| H-Bond Donors: | 4 |
| Rings: | 1 |
| Aromatic rings: | 0 |
| Anionic atoms: | 2 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 5 |
| X | Y | Z |
|---|---|---|
| 78.9326 | 12.0184 | 40.2622 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O18 | N | GLY- 11 | 3.08 | 153.78 | H-Bond (Protein Donor) |
| O17 | OG | SER- 12 | 2.63 | 157.36 | H-Bond (Protein Donor) |
| O17 | N | SER- 12 | 3.01 | 149.5 | H-Bond (Protein Donor) |
| O16 | ND2 | ASN- 13 | 3.37 | 150.71 | H-Bond (Protein Donor) |
| O16 | N | ASN- 13 | 3.1 | 165.06 | H-Bond (Protein Donor) |
| C2 | CG2 | ILE- 107 | 4.1 | 0 | Hydrophobic |
| C2 | CG | PRO- 109 | 4.42 | 0 | Hydrophobic |
| O6 | NE2 | GLN- 170 | 2.85 | 175.08 | H-Bond (Protein Donor) |
| O6 | OE1 | GLU- 173 | 2.55 | 159.86 | H-Bond (Ligand Donor) |
| O8 | OE2 | GLU- 173 | 2.54 | 140.77 | H-Bond (Ligand Donor) |
| O8 | OE1 | GLU- 173 | 3.38 | 156.67 | H-Bond (Ligand Donor) |