Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
5f8u | P32 | Beta-1 adrenergic receptor |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
5f8u | P32 | Beta-1 adrenergic receptor | / | 1.000 | |
4amj | CVD | Beta-1 adrenergic receptor | / | 0.541 | |
2ycw | CAU | Beta-1 adrenergic receptor | / | 0.525 | |
2ycz | I32 | Beta-1 adrenergic receptor | / | 0.524 | |
2ycy | P32 | Beta-1 adrenergic receptor | / | 0.522 | |
2y01 | Y00 | Beta-1 adrenergic receptor | / | 0.516 | |
2y03 | 5FW | Beta-1 adrenergic receptor | / | 0.512 | |
4ami | G90 | Beta-1 adrenergic receptor | / | 0.504 | |
2ycx | P32 | Beta-1 adrenergic receptor | / | 0.502 | |
3zpq | XF5 | Beta-1 adrenergic receptor | / | 0.500 | |
5a8e | XTK | Beta-1 adrenergic receptor | / | 0.494 | |
2y04 | 68H | Beta-1 adrenergic receptor | / | 0.469 | |
4gbr | CAU | Beta-2 adrenergic receptor | / | 0.460 | |
5d6l | CAU | Beta-2 adrenergic receptor | / | 0.450 | |
5d5a | CAU | Beta-2 adrenergic receptor | / | 0.446 |