Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
5d8u | 0N8 | Polymerase acidic protein |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
5d8u | 0N8 | Polymerase acidic protein | / | 1.000 | |
4e5h | 0N8 | Polymerase acidic protein | / | 0.575 | |
4e5j | 581 | Polymerase acidic protein | / | 0.542 | |
4avg | SL6 | Polymerase acidic protein | / | 0.536 | |
5fdg | 0N8 | Polymerase acidic protein | / | 0.533 | |
4e5l | DBH | Polymerase acidic protein | / | 0.511 | |
4awm | KDH | Polymerase acidic protein | / | 0.501 | |
5d9j | 0N8 | Polymerase acidic protein | / | 0.473 | |
5cgv | 0N8 | Polymerase acidic protein | / | 0.472 | |
4awg | CI3 | Polymerase acidic protein | / | 0.452 | |
3ex8 | AIF | Riboflavin biosynthesis protein RibD | 1.1.1.193 | 0.450 | |
2j2p | SC2 | Ficolin-2 | / | 0.445 | |
4x7y | SAH | Mycinamicin III 3''-O-methyltransferase | 2.1.1.237 | 0.442 | |
4e5i | 0N9 | Polymerase acidic protein | / | 0.440 |