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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
5coqTCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.9

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
5coqTCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.91.000
5cp8TCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.634
4tzk641Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.587
4trj665Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.564
2x23TCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.562
3fne8PCEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.553
2b35TCLEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.550
2b365PPEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.524
3fnhJPJEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.517
3fnfJPMEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.503
3uic09TEnoyl-[acyl-carrier-protein] reductase [NADH]/0.494
4u0k744Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.472
1zxlJP1Enoyl-ACP reductase/0.471
1bvrTHTEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.466
1zsnTN2Enoyl-ACP reductase/0.466
4oxyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.466
2nsd4PIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.449
3kpkFADSulfide-quinone reductase/0.445