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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4z3dNDPCarbonyl reductase [NADPH] 11.1.1.184

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4z3dNDPCarbonyl reductase [NADPH] 11.1.1.1841.000
1snyNAPLD36273p/0.540
3bhiNAPCarbonyl reductase [NADPH] 11.1.1.1840.526
1n5dNDPCarbonyl reductase [NADPH] 1/0.501
1ae1NAPTropinone reductase 1/0.479
1edoNAP3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic1.1.1.1000.476
1x7gNAPPutative ketoacyl reductase1.3.10.476
1x7hNDPPutative ketoacyl reductase1.3.10.474
4c7kNAPCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.474
4dc1NDPPutative ketoacyl reductase1.3.10.471
3sjuNDPKeto reductase/0.461
4hwkNAPSepiapterin reductase1.1.1.1530.460
5idwNAPShort-chain dehydrogenase/reductase SDR/0.458
1w4zNAPPutative ketoacyl reductase1.3.10.457
1xkqNDPUncharacterized protein/0.453
3sx2NADUncharacterized protein/0.452
3toxNAPPutative oxidoreductase/0.452
1ipeNDPTropinone reductase 21.1.1.2360.451
3o4rNAPDehydrogenase/reductase SDR family member 41.1.1.1840.451
5jlaNADPutative short-chain dehydrogenase/reductase/0.451
1vl8NAPOxidoreductase, short chain dehydrogenase/reductase family/0.449
4qecNAPElxO/0.449
1pr9NAPL-xylulose reductase1.1.1.100.447
3qrwNDPPutative ketoacyl reductase1.3.10.443
1xg5NAPDehydrogenase/reductase SDR family member 11/0.442
4rf2NAPNADPH dependent R-specific alcohol dehydrogenase/0.442
5js6NAD17-beta-hydroxysteroid dehydrogenase 141.1.10.442
2dknNAI3-alpha-hydroxysteroid dehydrogenase/0.441
2zatNAPDehydrogenase/reductase SDR family member 41.1.1.1840.441
3u4cNDPNADPH-dependent reductase BacG/0.441
5jsfNAD17-beta-hydroxysteroid dehydrogenase 141.1.10.441
2dteNAIGlucose 1-dehydrogenase related protein/0.440