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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4yau2AMNADPH--cytochrome P450 reductase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4yau2AMNADPH--cytochrome P450 reductase/1.000
4yaw2AMNADPH--cytochrome P450 reductase/0.616
4yal2AMNADPH--cytochrome P450 reductase/0.610
4y7cNAPNADPH--cytochrome P450 reductase/0.595
4y9rNAPNADPH--cytochrome P450 reductase/0.585
1amoNAPNADPH--cytochrome P450 reductase/0.584
4y9uNAPNADPH--cytochrome P450 reductase/0.558
4yaf2AMNADPH--cytochrome P450 reductase/0.548
3qftNAPNADPH--cytochrome P450 reductase/0.531
3qfrNAPNADPH--cytochrome P450 reductase/0.530
3qfsNAPNADPH--cytochrome P450 reductase/0.526
3qfcNAPNADPH--cytochrome P450 reductase/0.516
1ja1NAPNADPH--cytochrome P450 reductase/0.512
3qe2NAPNADPH--cytochrome P450 reductase/0.512
1f20NAPNitric oxide synthase, brain1.14.13.390.494
3ojxNAPNADPH--cytochrome P450 reductase/0.460
2bpoNAPNADPH--cytochrome P450 reductase/0.446