Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4y6g | F6F | Tryptophan synthase alpha chain |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
4y6g | F6F | Tryptophan synthase alpha chain | / | 1.000 | |
1k7f | IAV | Tryptophan synthase alpha chain | / | 0.553 | |
1k8z | IAG | Tryptophan synthase alpha chain | / | 0.505 | |
2cle | F6F | Tryptophan synthase alpha chain | / | 0.498 | |
2clf | F6F | Tryptophan synthase alpha chain | / | 0.497 | |
1qoq | IGP | Tryptophan synthase alpha chain | / | 0.496 | |
4zqc | F6F | Tryptophan synthase alpha chain | / | 0.479 | |
1k8y | 13P | Tryptophan synthase alpha chain | / | 0.474 | |
1kfb | IGP | Tryptophan synthase alpha chain | / | 0.471 | |
1kfc | IPL | Tryptophan synthase alpha chain | / | 0.451 | |
2rh9 | IGP | Tryptophan synthase alpha chain | / | 0.450 |