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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4xzmNAPAldo-keto reductase family 1 member B101.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4xzmNAPAldo-keto reductase family 1 member B101.1.11.000
4xznNAPAldo-keto reductase family 1 member B101.1.10.590
1x96NAPAldose reductase1.1.1.210.527
2acqNAPAldose reductase1.1.1.210.517
1ef3NAPAldose reductase1.1.1.210.516
2iq0NAPAldose reductase1.1.1.210.511
3q65NAPAldose reductase1.1.1.210.510
3wbwNDPPutative 2,5-diketo-D-gluconic acid reductase/0.502
2vdgNDPAldose reductase1.1.1.210.499
4pmjNAPPutative oxidoreductase/0.499
1z8aNAPAldose reductase1.1.1.210.488
2pevNDPAldose reductase1.1.1.210.485
3h7uNAPNADPH-dependent aldo-keto reductase, chloroplastic/0.485
3v36NAPAldose reductase1.1.1.210.483
1adsNAPAldose reductase1.1.1.210.476
4h8nNDPNADPH-dependent conjugated polyketone reductase C2/0.470
3h7rNAPAldo-keto reductase family 4 member C8/0.467
3qkzNAPAldose reductase-related protein 11.1.1.210.463
3q67NAPAldose reductase1.1.1.210.462
2acuNAPAldose reductase1.1.1.210.461
1r38NAPNAD(P)H-dependent D-xylose reductase1.1.1.3070.457
5c7hNDPPutative oxidoreductase/0.453
3buvNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.447
2hejNDPAldo-keto reductase family 1 member C211.1.10.442
1zgdNAPChalcone reductase/0.440