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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4xw4ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4xw4ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
4iacACPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.700
3x2wATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.613
3idbANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.574
3x2uATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.543
3x2vATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.504
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.499
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.498
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.486
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.485
3o7lANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.484
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.471
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.466
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.465
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.464
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.464
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
4iakADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.456
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.455
4iayADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.453
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.451
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.450
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.446
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.445
4iazADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.445
4dg3ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.444
4dh5ADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.443
4ekkANPRAC-alpha serine/threonine-protein kinase2.7.11.10.441
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440