Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4uxj | TTP | Thymidine kinase |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
4uxj | TTP | Thymidine kinase | / | 1.000 | |
2uz3 | TTP | Thymidine kinase | / | 0.536 | |
2b8t | THM | Thymidine kinase | / | 0.500 | |
5fuw | THM | Thymidine kinase, putative | / | 0.465 | |
5fuv | THM | Thymidine kinase, putative | / | 0.455 | |
4riy | ANP | Receptor tyrosine-protein kinase erbB-3 | 2.7.10.1 | 0.451 | |
1omo | NAD | Alanine dehydrogenase | / | 0.449 |