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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4uthFMNXenobiotic reductase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4uthFMNXenobiotic reductase/1.000
3l5lFMNXenobiotic reductase/0.801
3n14FMNXenobiotic reductase/0.701
4utlFNRXenobiotic reductase/0.555
3n19FNRXenobiotic reductase/0.511
3l67FMNXenobiotic reductase/0.489
3hf3FMNChromate reductase/0.461