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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4trj665Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.9

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4trj665Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.91.000
4tzk641Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.708
5cp8TCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.518
2b365PPEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.514
1bvrTHTEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.507
1p44GEQEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.489
3fnfJPMEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.483
2b35TCLEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.474
4tzt468Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.464
4bqrIBHEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.446
2nsd4PIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.442