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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4pv5CBWLactoylglutathione lyase4.4.1.5

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4pv5CBWLactoylglutathione lyase4.4.1.51.000
2za0MGILactoylglutathione lyase4.4.1.50.503
1froGSBLactoylglutathione lyase4.4.1.50.489
3vw9HPJLactoylglutathione lyase4.4.1.50.488
1qipGNBLactoylglutathione lyase4.4.1.50.459
4kyhZSTLactoylglutathione lyase4.4.1.50.455
4kykIMNLactoylglutathione lyase4.4.1.50.442