sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4nbb | 9CA | Terminal oxygenase component of carbazole |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 4nbb | 9CA | Terminal oxygenase component of carbazole | / | 1.000 | |
| 4nbh | 9CA | Terminal oxygenase component of carbazole | / | 0.636 | |
| 3vtd | TKD | Vitamin D3 receptor | / | 0.448 | |
| 4iae | 1DX | Alr2278 protein | / | 0.448 | |
| 1i5r | HYC | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.446 | |
| 2cf6 | NAP | Cinnamyl alcohol dehydrogenase 5 | 1.1.1.195 | 0.444 | |
| 2znq | 401 | Peroxisome proliferator-activated receptor delta | / | 0.440 |