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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4mz7DGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.5

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4mz7DGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.51.000
4rxsTTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.529
4rxpDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.465
4bzbDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.444