sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4m99 | ACO | UDP-N-acetylgalactosaminyltransferase |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 4m99 | ACO | UDP-N-acetylgalactosaminyltransferase | / | 1.000 | |
| 1lwi | NAP | 3-alpha-hydroxysteroid dehydrogenase | 1.1.1.50 | 0.462 | |
| 3qwb | NDP | Probable quinone oxidoreductase | 1.6.5.5 | 0.461 | |
| 4jtq | NAP | Aldo-keto reductase family 1 member C2 | / | 0.461 | |
| 1yb5 | NAP | Quinone oxidoreductase | 1.6.5.5 | 0.451 | |
| 1w5t | ANP | ORC1-type DNA replication protein 2 | / | 0.442 | |
| 2dte | NAI | Glucose 1-dehydrogenase related protein | / | 0.442 | |
| 3r7k | FDA | Probable acyl CoA dehydrogenase | / | 0.442 | |
| 4fn4 | NAD | Short chain dehydrogenase | / | 0.442 |