Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4m6q20TNicotinamide phosphoribosyltransferase2.4.2.12

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4m6q20TNicotinamide phosphoribosyltransferase2.4.2.121.000
4m6p20RNicotinamide phosphoribosyltransferase2.4.2.120.708
4lwwLWWNicotinamide phosphoribosyltransferase2.4.2.120.550
4kfp1R7Nicotinamide phosphoribosyltransferase2.4.2.120.548
4kfo1QSNicotinamide phosphoribosyltransferase2.4.2.120.547
4ltsLTSNicotinamide phosphoribosyltransferase2.4.2.120.530
4o1dDGBNicotinamide phosphoribosyltransferase2.4.2.120.530
4lva20MNicotinamide phosphoribosyltransferase2.4.2.120.529
4o281QSNicotinamide phosphoribosyltransferase2.4.2.120.525
4jr51LSNicotinamide phosphoribosyltransferase2.4.2.120.518
4kfn1QRNicotinamide phosphoribosyltransferase2.4.2.120.504
4jnm1LJNicotinamide phosphoribosyltransferase2.4.2.120.502
4lvb20NNicotinamide phosphoribosyltransferase2.4.2.120.493
2gvjDGBNicotinamide phosphoribosyltransferase2.4.2.120.491
2gvgNMNNicotinamide phosphoribosyltransferase2.4.2.120.451
2h3dNMNNicotinamide phosphoribosyltransferase2.4.2.120.446
2g96NMNNicotinamide phosphoribosyltransferase2.4.2.120.442