Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4jyz | ATP | Glutamine--tRNA ligase | 6.1.1.18 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
4jyz | ATP | Glutamine--tRNA ligase | 6.1.1.18 | 1.000 | |
4jxx | ATP | Glutamine--tRNA ligase | 6.1.1.18 | 0.621 | |
4jxz | ATP | Glutamine--tRNA ligase | 6.1.1.18 | 0.621 | |
1qrs | ATP | Glutamine--tRNA ligase | 6.1.1.18 | 0.612 | |
1qrt | ATP | Glutamine--tRNA ligase | 6.1.1.18 | 0.609 | |
1qru | ATP | Glutamine--tRNA ligase | 6.1.1.18 | 0.599 | |
2rd2 | QSI | Glutamine--tRNA ligase | 6.1.1.18 | 0.590 | |
1gtr | ATP | Glutamine--tRNA ligase | 6.1.1.18 | 0.586 | |
1qtq | QSI | Glutamine--tRNA ligase | 6.1.1.18 | 0.580 | |
1euy | QSI | Glutamine--tRNA ligase | 6.1.1.18 | 0.574 | |
2re8 | GSU | Glutamine--tRNA ligase | 6.1.1.18 | 0.571 |