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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4ict1EDMycocyclosin synthase1.14.21.9

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4ict1EDMycocyclosin synthase1.14.21.91.000
4ipw1G7Mycocyclosin synthase1.14.21.90.753
4ips1G4Mycocyclosin synthase1.14.21.90.741
4iq71G9Mycocyclosin synthase1.14.21.90.708
3g5hYTTMycocyclosin synthase1.14.21.90.618
4g48PZBMycocyclosin synthase1.14.21.90.585
4ktf1TMCytochrome P450/0.566
4ktl1CQCytochrome P450/0.562
4g2gTDHMycocyclosin synthase1.14.21.90.523
4g47TZFMycocyclosin synthase1.14.21.90.518
4ktkKTKCytochrome P450/0.515