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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4iazADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4iazADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
4iakADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.633
4iayADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.609
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.532
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.531
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.517
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.511
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.504
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.499
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.499
1jbpADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.495
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.492
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.490
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.488
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.487
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.485
4iacACPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.481
3x2wATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.476
4xw4ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.476
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.475
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.474
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.472
4xw5ATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.470
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.466
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.466
3x2uATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.466
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.463
3cqwCQWRAC-alpha serine/threonine-protein kinase2.7.11.10.462
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.458
3i4bZ48Glycogen synthase kinase-3 beta2.7.11.260.458
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.455
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.455
4ekkANPRAC-alpha serine/threonine-protein kinase2.7.11.10.455
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
3o7lANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
3oogYTPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
4qnyANPMitogen activated protein kinase, putative/0.446
3ambVX6cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.445
1q24ATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.444
4o0rX4ZSerine/threonine-protein kinase PAK 12.7.11.10.444
4wbbADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.444
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.443
2uw4L15cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442
4dh5ADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440