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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4g2gTDHMycocyclosin synthase1.14.21.9

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4g2gTDHMycocyclosin synthase1.14.21.91.000
4g47TZFMycocyclosin synthase1.14.21.90.799
4ktkKTKCytochrome P450/0.789
4ktl1CQCytochrome P450/0.674
4ktf1TMCytochrome P450/0.669
4g48PZBMycocyclosin synthase1.14.21.90.656
4ips1G4Mycocyclosin synthase1.14.21.90.623
3g5hYTTMycocyclosin synthase1.14.21.90.617
4ipw1G7Mycocyclosin synthase1.14.21.90.610
4iq71G9Mycocyclosin synthase1.14.21.90.572
4ict1EDMycocyclosin synthase1.14.21.90.569