Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4dwvPFBAlcohol dehydrogenase E chain1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4dwvPFBAlcohol dehydrogenase E chain1.1.1.11.000
5kjePFBAlcohol dehydrogenase E chain1.1.1.10.817
3oq6PFBAlcohol dehydrogenase E chain1.1.1.10.762
5kj1NAJAlcohol dehydrogenase E chain1.1.1.10.750
5cdsPFBAlcohol dehydrogenase E chain1.1.1.10.691
5cdgPFBAlcohol dehydrogenase E chain1.1.1.10.689
4nfhPFBAlcohol dehydrogenase E chain1.1.1.10.684
5kj1PFBAlcohol dehydrogenase E chain1.1.1.10.679
5cdtPFBAlcohol dehydrogenase E chain1.1.1.10.673
5kjcPFBAlcohol dehydrogenase E chain1.1.1.10.665
5kj6PFBAlcohol dehydrogenase E chain1.1.1.10.663
4ng5PFBAlcohol dehydrogenase E chain1.1.1.10.657
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.651
5cdtNAJAlcohol dehydrogenase E chain1.1.1.10.642
5kcpPFBAlcohol dehydrogenase E chain1.1.1.10.639
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.622
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.611
1hetNADAlcohol dehydrogenase E chain1.1.1.10.606
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.604
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.594
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.591
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.591
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.562
1hf3NADAlcohol dehydrogenase E chain1.1.1.10.551
1heuNADAlcohol dehydrogenase E chain1.1.1.10.541
6adhNADAlcohol dehydrogenase E chain1.1.1.10.471
1e3eNAIAlcohol dehydrogenase 41.1.1.10.445