sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4dc1 | NDP | Putative ketoacyl reductase | 1.3.1 |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 4dc1 | NDP | Putative ketoacyl reductase | 1.3.1 | 1.000 | |
| 1w4z | NAP | Putative ketoacyl reductase | 1.3.1 | 0.585 | |
| 1x7h | NDP | Putative ketoacyl reductase | 1.3.1 | 0.572 | |
| 3sju | NDP | Keto reductase | / | 0.565 | |
| 1x7g | NAP | Putative ketoacyl reductase | 1.3.1 | 0.539 | |
| 3qrw | NDP | Putative ketoacyl reductase | 1.3.1 | 0.534 | |
| 4i5e | NAP | Alclohol dehydrogenase/short-chain dehydrogenase | / | 0.481 | |
| 5jla | NAD | Putative short-chain dehydrogenase/reductase | / | 0.478 | |
| 1xse | NDP | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.457 | |
| 4bms | NAP | Alclohol dehydrogenase/short-chain dehydrogenase | / | 0.454 | |
| 3u4c | NDP | NADPH-dependent reductase BacG | / | 0.450 | |
| 1ae1 | NAP | Tropinone reductase 1 | / | 0.444 | |
| 4c7k | NAP | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.441 | |
| 1wnt | NAP | L-xylulose reductase | 1.1.1.10 | 0.440 |