Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4c77N01Phenylacetone monooxygenase1.14.13.92

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4c77N01Phenylacetone monooxygenase1.14.13.921.000
4oviN01Phenylacetone monooxygenase1.14.13.920.639
4d03NAPPhenylacetone monooxygenase1.14.13.920.610
4d04NAPPhenylacetone monooxygenase1.14.13.920.609
2ylxNAPPhenylacetone monooxygenase1.14.13.920.594
2ylrNAPPhenylacetone monooxygenase1.14.13.920.581
2yltNAPPhenylacetone monooxygenase1.14.13.920.579
2ym1NAPPhenylacetone monooxygenase1.14.13.920.577
2ym2NAPPhenylacetone monooxygenase1.14.13.920.574
2ylwNAPPhenylacetone monooxygenase1.14.13.920.542
3gwdNAPCyclohexanone monooxygenase/0.494
3up4NAP2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase1.14.13.1600.475
3up5NAP2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase1.14.13.1600.449