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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4c43FADFerredoxin--NADP reductase1.18.1.2

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4c43FADFerredoxin--NADP reductase1.18.1.21.000
1go2FADFerredoxin--NADP reductase1.18.1.20.642
1qgyFADFerredoxin--NADP reductase1.18.1.20.642
1e64FADFerredoxin--NADP reductase1.18.1.20.622
1gjrFADFerredoxin--NADP reductase1.18.1.20.620
4bprFADFerredoxin--NADP reductase1.18.1.20.617
1qh0FADFerredoxin--NADP reductase1.18.1.20.616
1bjkFADFerredoxin--NADP reductase1.18.1.20.612
1e63FADFerredoxin--NADP reductase1.18.1.20.605
1h85FADFerredoxin--NADP reductase1.18.1.20.605
1queFADFerredoxin--NADP reductase1.18.1.20.597
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.596
2b5oFADFerredoxin--NADP reductase1.18.1.20.588
3vo2FADFerredoxin--NADP reductase/0.584
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.582
1b2rFADFerredoxin--NADP reductase1.18.1.20.581
1ogjFADFerredoxin--NADP reductase1.18.1.20.581
3zc3FADFerredoxin--NADP reductase1.18.1.20.577
1ogiFADFerredoxin--NADP reductase1.18.1.20.576
3w5uFADFerredoxin/0.575
1h42FADFerredoxin--NADP reductase1.18.1.20.572
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.569
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.567
1qgzFADFerredoxin--NADP reductase1.18.1.20.566
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.565
3zbtFADFerredoxin--NADP reductase1.18.1.20.562
1gawFADFerredoxin/0.561
1e62FADFerredoxin--NADP reductase1.18.1.20.560
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.558
1ewyFADFerredoxin--NADP reductase1.18.1.20.547
1w35FADFerredoxin--NADP reductase1.18.1.20.547
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.540
1ja1FADNADPH--cytochrome P450 reductase/0.540
1gaqFADFerredoxin/0.539
1w87FADFerredoxin--NADP reductase1.18.1.20.539
3qfsFADNADPH--cytochrome P450 reductase/0.533
1amoFADNADPH--cytochrome P450 reductase/0.530
1gr1FADFerredoxin--NADP reductase1.18.1.20.530
1sm4FADFerredoxin--NADP reductase/0.528
4yaoFADNADPH--cytochrome P450 reductase/0.527
2rc6FADFerredoxin--NADP reductase/0.523
1j9zFADNADPH--cytochrome P450 reductase/0.508
3qftFADNADPH--cytochrome P450 reductase/0.505
3fpkFADFerredoxin-NADP reductase/0.504
1bx0FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.489
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.486
2xncFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.485
3ojxFADNADPH--cytochrome P450 reductase/0.483
2rc5FADFerredoxin--NADP reductase/0.477
2ok8FADFerredoxin--NADP reductase, apicoplast/0.472
3qfcFADNADPH--cytochrome P450 reductase/0.471
1a8pFADFerredoxin--NADP reductase/0.462
4fk8FADFerredoxin--NADP reductase/0.458
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.454
1gvhFADFlavohemoprotein/0.453
2vnjFADNADPH:ferredoxin reductase/0.453
5ah5LSSLeucine--tRNA ligase/0.453
3er93ATPoly(A) polymerase catalytic subunit2.7.7.190.452
2wsa646Glycylpeptide N-tetradecanoyltransferase/0.451
2ok7FADFerredoxin--NADP reductase, apicoplast/0.447
2r6hFADNa(+)-translocating NADH-quinone reductase subunit F/0.446
3jqrFADFerredoxin--NADP reductase, apicoplast/0.446
1aquESTEstrogen sulfotransferase, testis isoform2.8.2.40.444
1f20FADNitric oxide synthase, brain1.14.13.390.444
5dp2NAPCurF/0.443
2geuCOKPantothenate kinase2.7.1.330.441
4a30QMIGlycylpeptide N-tetradecanoyltransferase/0.441