sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Distribution of Cavity similarities measured by Shaper

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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4c2z	646	Glycylpeptide N-tetradecanoyltransferase 1

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity	Align
4c2z	646	Glycylpeptide N-tetradecanoyltransferase 1	/	1.000
4a32	2CD	Glycylpeptide N-tetradecanoyltransferase	/	0.559
4a31	2CB	Glycylpeptide N-tetradecanoyltransferase	/	0.539
4a2z	VIQ	Glycylpeptide N-tetradecanoyltransferase	/	0.508
4a30	QMI	Glycylpeptide N-tetradecanoyltransferase	/	0.499
4b12	C23	Glycylpeptide N-tetradecanoyltransferase	/	0.484
2yne	YNE	Glycylpeptide N-tetradecanoyltransferase	/	0.471
4a95	9MT	Glycylpeptide N-tetradecanoyltransferase	/	0.443
4bbh	YBN	Glycylpeptide N-tetradecanoyltransferase	/	0.441