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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4bjcRPBTankyrase-22.4.2.30

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4bjcRPBTankyrase-22.4.2.301.000
4bjbP34Tankyrase-22.4.2.300.618
4bj9UHBTankyrase-22.4.2.300.613
4tjy3GNTankyrase-22.4.2.300.602
3u9y09LTankyrase-22.4.2.300.598
4pnmNU1Tankyrase-22.4.2.300.581
4k4eK4ETankyrase-12.4.2.300.538
4li81XQTankyrase-12.4.2.300.538
4pnrG18Tankyrase-22.4.2.300.532
4krs1SXTankyrase-12.4.2.300.531
4tkg09LTankyrase-22.4.2.300.526
3geyP34Poly [ADP-ribose] polymerase 152.4.2.300.523
4j3mAJ8Tankyrase-22.4.2.300.522
1xk9P34Exotoxin A2.4.2.360.514
4msg2C6Tankyrase-12.4.2.300.514
1efyBZCPoly [ADP-ribose] polymerase 12.4.2.300.511
3b8hNADExotoxin A2.4.2.360.502
4li71XPTankyrase-12.4.2.300.502
4mt92D6Tankyrase-12.4.2.300.502
4n4t2GVTankyrase-12.4.2.300.496
4li61XOTankyrase-12.4.2.300.495
3l3mA92Poly [ADP-ribose] polymerase 12.4.2.300.494
4msk2C8Tankyrase-12.4.2.300.492
2zitNADExotoxin A2.4.2.360.487
3c49KU8Poly [ADP-ribose] polymerase 32.4.2.300.487
4n4v2GYTankyrase-12.4.2.300.486
5ds309LPoly [ADP-ribose] polymerase 12.4.2.300.486
1paxDHQPoly [ADP-ribose] polymerase 12.4.2.300.483
3c4hDRLPoly [ADP-ribose] polymerase 32.4.2.300.482
3b82NADExotoxin A2.4.2.360.479
4hyf1AKTankyrase-22.4.2.300.476
4hhz15SPoly [ADP-ribose] polymerase 12.4.2.300.471
5dsyUHBPoly [ADP-ribose] polymerase 22.4.2.300.469
3b78NADExotoxin A2.4.2.360.468
4i9i1DYTankyrase-12.4.2.300.468
3ce0P34Poly [ADP-ribose] polymerase 32.4.2.300.467
4f0e0RUPoly [ADP-ribose] polymerase 152.4.2.300.463
1zm4TADExotoxin A2.4.2.360.460
2rd678PPoly [ADP-ribose] polymerase 12.4.2.300.453
2rcwAAIPoly [ADP-ribose] polymerase 12.4.2.300.452
4gv08MEPoly [ADP-ribose] polymerase 32.4.2.300.451
1dtpAPUDiphtheria toxin/0.448
3gn73GNPoly [ADP-ribose] polymerase 12.4.2.300.448
4tvj09LPoly [ADP-ribose] polymerase 22.4.2.300.443
3gjwGJWPoly [ADP-ribose] polymerase 12.4.2.300.442
4gv4MEJPoly [ADP-ribose] polymerase 32.4.2.300.442
1ddtAPUDiphtheria toxin/0.440
4r5wXAVPoly [ADP-ribose] polymerase 12.4.2.300.440