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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4bfxZVXPantothenate kinase2.7.1.33

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4bfxZVXPantothenate kinase2.7.1.331.000
4bftZVTPantothenate kinase2.7.1.330.661
4bfsZVSPantothenate kinase2.7.1.330.632
2getCOKPantothenate kinase2.7.1.330.575
4bfwZVWPantothenate kinase2.7.1.330.572
3af3GCPPantothenate kinase2.7.1.330.569
2zsbADPPantothenate kinase2.7.1.330.559
2zs8ADPPantothenate kinase2.7.1.330.552
2gevCOKPantothenate kinase2.7.1.330.551
4bfvZVVPantothenate kinase2.7.1.330.551
2zseACPPantothenate kinase2.7.1.330.550
2geuCOKPantothenate kinase2.7.1.330.549
2zsdCOAPantothenate kinase2.7.1.330.547
3af1GDPPantothenate kinase2.7.1.330.538
2gesCOKPantothenate kinase2.7.1.330.537
3af0GDPPantothenate kinase2.7.1.330.535
3aezGDPPantothenate kinase2.7.1.330.524
3af2ACPPantothenate kinase2.7.1.330.522
2zsaADPPantothenate kinase2.7.1.330.520
2zs9ADPPantothenate kinase2.7.1.330.499
4bfzZVZPantothenate kinase2.7.1.330.490
1esmCOAPantothenate kinase2.7.1.330.489
4bfuZVUPantothenate kinase2.7.1.330.486