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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4bfvZVVPantothenate kinase2.7.1.33

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4bfvZVVPantothenate kinase2.7.1.331.000
4bfwZVWPantothenate kinase2.7.1.330.653
4bftZVTPantothenate kinase2.7.1.330.614
2gevCOKPantothenate kinase2.7.1.330.585
4bfxZVXPantothenate kinase2.7.1.330.579
3af1GDPPantothenate kinase2.7.1.330.571
2zs8ADPPantothenate kinase2.7.1.330.565
2zsdCOAPantothenate kinase2.7.1.330.564
2geuCOKPantothenate kinase2.7.1.330.556
3af0GDPPantothenate kinase2.7.1.330.554
2getCOKPantothenate kinase2.7.1.330.548
4bfsZVSPantothenate kinase2.7.1.330.548
2zs9ADPPantothenate kinase2.7.1.330.545
2gesCOKPantothenate kinase2.7.1.330.541
2zseACPPantothenate kinase2.7.1.330.537
2zsaADPPantothenate kinase2.7.1.330.523
4bfuZVUPantothenate kinase2.7.1.330.519
2zsbADPPantothenate kinase2.7.1.330.515
3af4GCPPantothenate kinase2.7.1.330.511
3aezGDPPantothenate kinase2.7.1.330.510
4bfzZVZPantothenate kinase2.7.1.330.506
1esmCOAPantothenate kinase2.7.1.330.453