Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4bfuZVUPantothenate kinase2.7.1.33

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4bfuZVUPantothenate kinase2.7.1.331.000
4bfwZVWPantothenate kinase2.7.1.330.533
4bfzZVZPantothenate kinase2.7.1.330.517
4bfvZVVPantothenate kinase2.7.1.330.490
4bfxZVXPantothenate kinase2.7.1.330.480
2zs9ADPPantothenate kinase2.7.1.330.473
2zs8ADPPantothenate kinase2.7.1.330.457
3af1GDPPantothenate kinase2.7.1.330.451
4bfsZVSPantothenate kinase2.7.1.330.446
2gevCOKPantothenate kinase2.7.1.330.443
4bftZVTPantothenate kinase2.7.1.330.442