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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4bfsZVSPantothenate kinase2.7.1.33

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4bfsZVSPantothenate kinase2.7.1.331.000
2getCOKPantothenate kinase2.7.1.330.622
3af3GCPPantothenate kinase2.7.1.330.597
2gesCOKPantothenate kinase2.7.1.330.582
4bfxZVXPantothenate kinase2.7.1.330.565
3af2ACPPantothenate kinase2.7.1.330.561
3af4GCPPantothenate kinase2.7.1.330.556
2zs8ADPPantothenate kinase2.7.1.330.552
2zseACPPantothenate kinase2.7.1.330.552
2zsbADPPantothenate kinase2.7.1.330.543
2zsaADPPantothenate kinase2.7.1.330.542
4bftZVTPantothenate kinase2.7.1.330.540
2gevCOKPantothenate kinase2.7.1.330.539
4bfwZVWPantothenate kinase2.7.1.330.534
3aezGDPPantothenate kinase2.7.1.330.533
2geuCOKPantothenate kinase2.7.1.330.524
3af1GDPPantothenate kinase2.7.1.330.514
3af0GDPPantothenate kinase2.7.1.330.507
2zs9ADPPantothenate kinase2.7.1.330.502
2zsdCOAPantothenate kinase2.7.1.330.500
1esmCOAPantothenate kinase2.7.1.330.483
4bfvZVVPantothenate kinase2.7.1.330.483