sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Distribution of Cavity similarities measured by Shaper

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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4b12	C23	Glycylpeptide N-tetradecanoyltransferase

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity	Align
4b12	C23	Glycylpeptide N-tetradecanoyltransferase	/	1.000
2yne	YNE	Glycylpeptide N-tetradecanoyltransferase	/	0.624
4bbh	YBN	Glycylpeptide N-tetradecanoyltransferase	/	0.620
4b14	4XB	Glycylpeptide N-tetradecanoyltransferase	/	0.616
4b13	X25	Glycylpeptide N-tetradecanoyltransferase	/	0.589
4a31	2CB	Glycylpeptide N-tetradecanoyltransferase	/	0.562
4a2z	VIQ	Glycylpeptide N-tetradecanoyltransferase	/	0.547
4cax	646	Glycylpeptide N-tetradecanoyltransferase	2.3.1.97	0.523
4b11	7I1	Glycylpeptide N-tetradecanoyltransferase	/	0.488
4a30	QMI	Glycylpeptide N-tetradecanoyltransferase	/	0.482
4a95	9MT	Glycylpeptide N-tetradecanoyltransferase	/	0.463