sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Distribution of Cavity similarities measured by Shaper

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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4b10	NHW	Glycylpeptide N-tetradecanoyltransferase

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity	Align
4b10	NHW	Glycylpeptide N-tetradecanoyltransferase	/	1.000
4b12	NHW	Glycylpeptide N-tetradecanoyltransferase	/	0.639
4b14	NHW	Glycylpeptide N-tetradecanoyltransferase	/	0.633
2yne	NHW	Glycylpeptide N-tetradecanoyltransferase	/	0.627
5ag7	MYA	Glycylpeptide N-tetradecanoyltransferase	/	0.574
4cgp	MYA	Glycylpeptide N-tetradecanoyltransferase	/	0.562
4a30	MYA	Glycylpeptide N-tetradecanoyltransferase	/	0.557
5a27	MYA	Glycylpeptide N-tetradecanoyltransferase	/	0.557
4a2z	MYA	Glycylpeptide N-tetradecanoyltransferase	/	0.548
4a32	MYA	Glycylpeptide N-tetradecanoyltransferase	/	0.537
4b13	NHW	Glycylpeptide N-tetradecanoyltransferase	/	0.515
4c2x	NHW	Glycylpeptide N-tetradecanoyltransferase 2	/	0.507
4b11	NHW	Glycylpeptide N-tetradecanoyltransferase	/	0.491
4a95	NHW	Glycylpeptide N-tetradecanoyltransferase	/	0.478
5ag6	MYA	Glycylpeptide N-tetradecanoyltransferase	/	0.476
5ag5	MYA	Glycylpeptide N-tetradecanoyltransferase	/	0.463
2nmt	NHM	Glycylpeptide N-tetradecanoyltransferase	2.3.1.97	0.449
4c68	NHW	Glycylpeptide N-tetradecanoyltransferase	/	0.448
2ync	YNC	Glycylpeptide N-tetradecanoyltransferase	/	0.441